Case Analysis
Guide to understanding and navigating tabs and data in your Case
Filter Decision Trees
Decision tree creation and special filters
Creating and Managing Filter Decision TreesHow to build and manage your organization filter trees across different tests
Tree Het Compound Filter
Franklin best practices for case investigationhow to analyse your first genetic case using Franklin
Working in the WorkbenchLearn about the information shown in the Workbench, the main view of any case in Franklin, and how to leverage its insights
Franklin's AI-based variant prioritization engineLearn more about Franklin's artificial intelligence-driven algorithms to pinpoint the relevant variants in case analysis.
UPD detection in FranklinFranklin supports UPD detection in trio analysis
Collaborating with Your Team in FranklinCollaborate with your team in Franklin for streamlined genetic analysis using features like comments, evidence, and workload management.
Including Variants in the ReportLearn how to categorize variants into different reporting bins, in order to include them in the report
Conducting Automated Reanalysis in FranklinA guide to Franklin's embedded automated reanalysis features - "Follow variant" and "Follow case".
Case ProtocolsFranklin's Protocols allows you to better track and manage the progress of a cases in your organization
"Family Carrier Test" on Trio CasesTrio Cases include a "Family Carrier Test" that examines variants present in both parents.
Variant ConfidenceConfidence calculation for SNPs, Indels, CNVs and Fusions
CNV calling QC metricsCNV calling QC metrics aim to measure coverage distribution fit to reference samples distribution
Consanguinity and Relatedness checkRelatedness, consanguinity, and paternity tests in a family analysis
Franklin Confidence for Dragen 4.XThis document explains the parameters used to determine the confidence value for variants in the Dragen 4.X pipeline
Franklin's Advanced Filtering SystemOptimize sample analysis with Franklin's advanced filters. Our guide offers effective explanations and guidance for using all filters.
Creating and Managing Quick Filter Presets for Variant Triage in FranklinLearn how to easily create and manage quick filter presets for your laboratory's variant triage process.
Merged FiltersCombine multiple quick filters into one powerful preset to streamline variant review.