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Editing segments

Learn how to use Franklin's powerful visualization tools to modify the edges of your structural variants.

Luciana De Cesare avatar
Written by Luciana De Cesare
Updated over a year ago

When analyzing cases with segments or structural variants, it's possible you'll want to adjust the coordinates to match the exact edges of the CNV. Franklin allows you to edit structural variants from the Variant Interpretation hub.

Whether you're analyzing data from CMA or NGS, if your case has copy number variants or regions with loss of heterozygosity, you're likely to want to edit the exact length of the segment. For that, you should head over to the Variant Interpretation hub for that variant, which you can access by clicking on the tile that represents that variant on the workbench or the variant list, and then selecting Full detail view.

Once you're in the Variant Interpretation hub, on the top right corner, and beside the button to classify the variant, you can find the Edit variant button. There, you go to the panel on the right and modify the start and/or end-point of the segment according to your own criteria. Click Submit and you're done!

Still have questions? Reach out to our Support Team, they'll be happy to help!

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